基于cDNA-SCoT差異顯示的甘蔗應(yīng)答水分脅迫基因表達(dá)譜分析.pdf

基于cDNA-SCoT差異顯示的甘蔗應(yīng)答水分脅迫基因表達(dá)譜分析.pdf

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1、南方農(nóng)業(yè)學(xué)報(bào)JournalofSouthernAgriculture2016,47(12):1999—2008ISSN2095~1191;CODENNNXAABhttp://www.nfnyxb.comDOI:10,39690:issn.2095-1191,2016.12,1999GeneexpressionanalysisofsugarcaneresponsetowaterstressbasedoncDNA-SCoTdifferentialdisplaywuKai—cha01,HUANGCheng-mei2,DE

2、NGZhi-nianl,WEIYuan-wen2,CAOHui-qin92,XULinl,JIANGSheng—li2,WUJian—ruin91,YANGLi—ta03,LIYang-ruil+(1SugarcaneResearchInstitute,GuangxiAcademyofhgriculturalSciences/KeyLaboratoryofSugarcaneBiotechnologyandGeneticImprovement(Guangxi),MinistryofAgricuIture/Guangx

3、iKeyLaboratoryofSugarcaneGeneticImprovement,Nanning530007,China;2GuangxiCropGeneticImprovementandBiotechnologyLaboratory,Nanning530007,China;3GuangxiUniversity/GuangxiKeyLaboratoryofSubtropicalBioresourceConservationandUtilization,Nanning530004,China)Abstract:

4、【Objective】Thepresentstudywasconductedtostudytheexpressionofdifferentialgenesinsugarcaneresponsetowaterstressanditsmolecularmechanisminordertoprovidescientificbasisfordevelopinggeneticimprovementofsugarcanedroughtresistantintegrity.【Method】SugarcanecultivarGTl

5、1wasusedasmaterialtodesignthreetreatmentsviz.contr01.droughtandrewatering.The+1“l(fā)eavesofsugarcaneforthreetreatmentswereusedforextractingtotalRNAtoconstructtheirequalquantitymixedsolutions,andthegeneticexpressingprofilesofcuhivarGTl1atelongationstageunderwaters

6、tresswereconstructedbyusingeDNA-SCoTdifferentialdisplay.Thetranscriptderivedfragments(11DFs)werescreenedandisolatedtosequencing,followedbytheBLASThomologysearchinginNCBIdatabasetodeducegenefunctionbasedonhomologicalgenes.【Result】The180TDFswerescreenedbyusing42

7、primersofSCoTmarker,ofwhich100TDFswereofhighersimilaritywiththeaccessedgenesinNCBIdatabase.Accordingtohomologousgenefunction,these100TDFscouldbeclassifiedinto14types,whichincluded1metabolismrelatedgenes,12energymetabolismrelatedgenes,5transportpathwayrelatedge

8、nes,6communicationandsignaltransductionrelatedgenes,3celtcycleandDNAprocessingrelatedgenes,3transcriptregulatedfactorrelatedgenes,17proteinsynthesisrelatedgenes,1proteinprocessingr

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